2016
Arnone, M. I. (2016). Echinoderm systems for gene regulatory studies in evolution and development. Current Opinion in Genetics & Development 39, 129 - 137.
Basu, S., Hadzhiev, Y., Petrosino, G., Nepal, C., Gehrig, J., Armant, O., Ferg, M., Strahle, U., Sanges, R. and Müller, F. (2016). The Tetraodon nigroviridis reference transcriptome: developmental transition, length retention and microsynteny of long non-coding RNAs in a compact vertebrate genome. Scientific Reports 6, 33210.
Berenshtein, I., Rousseau, M., Scata, G., Fiorito, G. and Shashar, N. (2016). Observed and modelled camouflage response of European cuttlefish (Sepia officinalis) to different substrate patch sizes during movement. Frontiers in Physiology 7, 671.
Bevilacqua, S. and Terlizzi, A. (2016). Species surrogacy in environmental impact assessment and monitoring: extending the BestAgg approach to asymmetrical designs. Marine Ecology Progress Series 547, 19-32.
Boni, R., Gallo, A., Montanino, M., Macina, A. and Tosti, E. (2016). Dynamic changes in the sperm quality of Mytilus galloprovincialis under continuous thermal stress. Mol Reprod Dev 83, 162-73.
Brozovic, M., Martin, C., Dantec, C., Dauga, D., Mendez, M., Simion, P., Percher, M., Laporte, B., Scornavacca, C., Di Gregorio, A. et al. (2016). ANISEED 2015: a digital framework for the comparative developmental biology of ascidians. Nucleic Acids Res 44 (D1), D808-D818.
Castellano, I., Migliaccio, O., D'Aniello, S., Merlino, A., Napolitano, A. and Palumbo, A. (2016). Shedding light on ovothiol biosynthesis in marine metazoans. Sci Rep 6, 21506.
Ciezarek, A. G., Dunning, L. T., Jones, C. S., Noble, L. R., Humble, E., Stefanni, S. S. and Savolainen, V. (2016). Substitutions in the Glycogenin-1 Gene Are Associated with the Evolution of Endothermy in Sharks and Tunas. Genome Biol Evol 8, 3011-3021.
Coppola, U., Annona, G., D'Aniello, S. and Ristoratore, F. (2016). Rab32 and Rab38 genes in chordate pigmentation: an evolutionary perspective. BMC Evol Biol 16, 26.
Costantini, M., Greif, G., Alvarez-Valin, F. and Bernardi, G. (2016). The Anolis Lizard Genome: An Amniote Genome without Isochores? Genome Biol Evol 8, 1048-55.
D'Agostino, Y., Locascio, A., Ristoratore, F., Sordino, P., Spagnuolo, A., Borra, M. and D'Aniello, S. (2016). A Rapid and Cheap Methodology for CRISPR/Cas9 Zebrafish Mutant Screening. Mol Biotechnol 58, 73-8.
De Luca, D., Catanese, G., Procaccini, G. and Fiorito, G. (2016). Octopus vulgaris (Cuvier, 1797) in the Mediterranean Sea: Genetic Diversity and Population Structure. PLoS One 11, e0149496.
Fortunato, A., Boni, R., Leo, R., Nacchia, G., Liguori, F., Casale, S., Bonassisa, P. and Tosti, E. (2016). Vacuoles in sperm head are not associated with head morphology, DNA damage and reproductive success. Reprod Biomed Online 32, 154-161.
Ferramosca, A., Conte, A., Guerra, F., Felline, S., Rimoli, M. G., Mollo, E., Zara, V. and Terlizzi, A. (2016). Metabolites from invasive pests inhibit mitochondrial complex II: A potential strategy for the treatment of human ovarian carcinoma? Biochemical and biophysical research communications 473(4), 1133-1138.
Fortunato, A., Boni, R., Leo, R., Nacchia, G., Liguori, F., Casale, S., Bonassisa, P. and Tosti, E. (2016a). Vacuoles in sperm head are not associated with head morphology, DNA damage and reproductive success. Reproductive BioMedicine Online 32, 154-61.
Fortunato, A. E., Sordino, P. and Andreakis, N. (2016b). Evolution of the SOUL Heme-Binding Protein Superfamily Across Eukarya. J Mol Evol 82, 279-90.
Gallina, A. A., Palumbo, A. and Casotti, R. (2016). Oxidative pathways in response to polyunsaturated aldehydes in the marine diatom Skeletonema marinoi (Bacillariophyceae). J Phycol. 52, 590–598.
Gallo, A., Boni, R., Buttino, I. and Tosti, E. (2016). Spermiotoxicity of nickel nanoparticles in the marine invertebrate Ciona intestinalis (ascidians). Nanotoxicology, 1-9.
Gallo, A. and Tosti, E. (2016). Adverse Effect of Ocean Acidification on Marine Organisms. J Marine Sci Res Dev 6, e139.
Josef, N., Berenshtein, I., Rousseau, M., Scata, G., Fiorito, G. and Shashar, N. (2016). Size Matters: Observed and Modeled Camouflage Response of European Cuttlefish (Sepia officinalis) to Different Substrate Patch Sizes during Movement. Frontiers in Physiology 7.
Karaz, S., Courgeon, M., Lepetit, H., Bruno, E., Pannone, R., Tarallo, A., Thouzé, F., Kerner, P., Vervoort, M., Causeret, F., Pierani, A., D'Onofrio, G. (2016). Neuronal fate specification by the Dbx1 transcription factor is linked to the evolutionary acquisition of a novel functional domain. EvoDevo 7, 1-13.
Mao, C. A., Agca, C., Mocko-Strand, J. A., Wang, J., Ullrich-Luter, E., Pan, P., Wang, S. W., Arnone, M. I., Frishman, L. J. and Klein, W. H. (2016). Substituting mouse transcription factor Pou4f2 with a sea urchin orthologue restores retinal ganglion cell development. Proceedings of the Royal Society B-Biological Sciences 283.
Martella, A., Sepe, R. M., Silvestri, C., Zang, J., Fasano, G., Carnevali, O., De Girolamo, P., Neuhauss, S. C. F., Sordino, P. and Di Marzo, V. (2016). Important role of endocannabinoid signaling in the development of functional vision and locomotion in zebrafish. The FASEB Journal 30, 4275-4288.
Migliaccio, O., Castellano, I., Di Cioccio, D., Tedeschi, G., Negri, A., Cirino, P., Romano, G., Zingone, A. and Palumbo, A. (2016). Subtle reproductive impairment through nitric oxide-mediated mechanisms in sea urchins from an area affected by harmful algal blooms. Scientific Reports 6, 26086.
Moreno-Valcárcel, R., Oliva-Paterna, F. J., Bevilacqua, S., Terlizzi, A. and Fernández-Delgado, C. (2016). Long-term effects of tidal restriction on fish assemblages in east Atlantic coastal marshlands. Marine Ecology Progress Series 543, 209-222.
Pagano, G., Guida, M., Siciliano, A., Oral, R., Kocbas, F., Palumbo, A., Castellano, I., Migliaccio, O., Thomas, P. J. and Trifuoggi, M. (2016). Comparative toxicities of selected rare earth elements: Sea urchin embryogenesis and fertilization damage with redox and cytogenetic effects. Environ Res 147, 453-60.
Perillo, M., Wang, Y. J., Leach, S. D. and Arnone, M. I. (2016). A pancreatic exocrine-like cell regulatory circuit operating in the upper stomach of the sea urchin Strongylocentrotus purpuratus larva. BMC Evol Biol 16, 117.
Pugliese, C., Mazza, R., Andrews, P. L., Cerra, M. C., Fiorito, G. and Gattuso, A. (2016). Effect of Different Formulations of Magnesium Chloride Used As Anesthetic Agents on the Performance of the Isolated Heart of Octopus vulgaris. Frontiers in Physiology 7.
Rizzo, F., Coffman, J. A. and Arnone, M. I. (2016). An Elk transcription factor is required for Runx-dependent survival signaling in the sea urchin embryo. Dev Biol. 416, 173–186.
Romano, G., Costantini, M., Sansone, C., Lauritano, C., Ruocco, N. and Ianora, A. (2016). Marine microorganisms as a promising and sustainable source of bioactive molecules. Mar Environ Res. In press; Available online: 3 May 2016.
Ruocco, N., Costantini, M. and Santella, L. (2016). New insights into negative effects of lithium on sea urchin Paracentrotus lividus embryos. Scientific Reports 6.
Ruocco, N., Costantini, S. and Costantini, M. (2016). Blue-Print Autophagy: Potential for Cancer Treatment. Marine Drugs 14, 138.
Ruocco, N., Costantini, S., Guariniello, S. and Costantini, M. (2016). Polysaccharides from the Marine Environment with Pharmacological, Cosmeceutical and Nutraceutical Potential. Molecules 21.
Ruocco, N., Varrella, S., Romano, G., Ianora, A., Bentley, M. G., Somma, D., Leonardi, A., Mellone, S., Zuppa, A. and Costantini, M. (2016). Diatom-derived oxylipins induce cell death in sea urchin embryos activating caspase-8 and caspase 3/7. Aquat Toxicol 176, 128-40.
Shaw, T. J., Osborne, M., Ponte, G., Fiorito, G. and Andrews, P. L. (2016). Mechanisms of wound closure following acute arm injury in Octopus vulgaris. Zoological Lett 2, 8.
Taddei, L., Stella, G. R., Rogato, A., Bailleul, B., Fortunato, A. E., Annunziata, R., Sanges, R., Thaler, M., Lepetit, B., Lavaud, J., Jaubert, M., Finazzi, G., Bouly, J.P., Falciatore, A. (2016). Multisignal control of expression of the LHCX protein family in the marine diatom Phaeodactylum tricornutum. J Exp Bot 67, 3939-51.
Tarallo, A., Angelini, C., Sanges, R., Yagi, M., Agnisola, C. and D'Onofrio, G. (2016). On the genome base composition of teleosts: the effect of environment and lifestyle. BMC Genomics 17, 173.
Tarallo, A., Gambi, M. C. and D'Onofrio, G. (2016b). Lifestyle and DNA base composition in polychaetes. Physiological Genomics 48, 883-888.
Tarallo, A., Yagi, M., Oikawa, S., Agnisola, C. and D'Onofrio, G. (2016). Comparative morpho-physiological analysis between Ciona robusta and Ciona savignyi. Journal of Experimental Marine Biology and Ecology 485, 83-87.
Tosti, E., Boni, R. and Gallo, A. (2016). Ion currents in embryo development. Birth Defects Res C Embryo Today 108, 6-18.
Tosti, E. and Menezo, Y. (2016). Gamete activation: basic knowledge and clinical applications. Hum Reprod Update 22, 420-39.
Valero-Gracia, A., Marino, R., Crocetta, F., Nittoli, V., Tiozzo, S. and Sordino, P. (2016a). Comparative localization of serotonin-like immunoreactive cells in Thaliacea informs tunicate phylogeny. Frontiers in Zoology 13.
Valero-Gracia, A., Petrone, L., Oliveri, P., Nilsson, D. E. and Arnone, M. I. (2016b). Non-directional photoreceptors in the pluteus of Strongylocentrotus purpuratus. Frontiers in Ecology and Evolution 4.
Varrella, S., Romano, G., Costantini, S., Ruocco, N., Ianora, A., Bentley, M. G. and Costantini, M. (2016). Toxic Diatom Aldehydes Affect Defence Gene Networks in Sea Urchins. PLoS One 11, e0149734.
Varrella, S., Romano, G., Ruocco, N., Ianora, A., Bentley, M. G. and Costantini, M. (2016). First Morphological and Molecular Evidence of the Negative Impact of Diatom-Derived Hydroxyacids on the Sea Urchin Paracentrotus lividus. Toxicol Sci 151, 419-33.
Verde, C., Giordano, D., Bellas, C. M., di Prisco, G. and Anesio, A. M. (2016). Chapter Four-Polar Marine Microorganisms and Climate Change. Advances in Microbial Physiology 69, 187-215.
Books and/or Book Chapters
Lowe, E. K., Cuomo, C. and Arnone, M. I. (2016). A Differential Transcriptomic Approach to Compare Target Genes of Homologous Transcription Factors in Echinoderm Species. In Dynamics of Mathematical Models in Biology: Springer International Publishing.
Martinez-Morales, J. R. and Locascio, A. (2016). Vertebrate Eye Evolution. In Organogenetic Gene Networks, (ed. J. Castelli-Gair Hombría, Bovolenta, Paola (Eds)), pp. 275-298: Springer International Publishing.
